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Tool · Data labeling

Medical Data Labeling Scoping Calculator

Planning to label medical images, clinical text, EEG, ECG, PPG or sleep data? Answer five questions to get a starting QC plan: how many items to double-label, which agreement metric to report, how to resolve disagreements, and a rough range of labeler-hours. Every default is either sourced or marked as an editable assumption.

Format
Interactive calculator
Time
About 2 minutes
Checked
October 27, 2026
1. What kind of data?
2. How many items?
3. What type of label?
4. Labelers per double-labeled item
5. Task complexity
Contains PHI?
For an FDA submission?
Advanced: edit assumptions



This tool gives general planning estimates based on editable assumptions and published methods. It is not medical, legal or regulatory advice, it is not a quote, and it does not determine what FDA or any regulator will accept. Talk to qualified regulatory counsel about your submission.

All calculation happens in your browser. Nothing you enter is sent anywhere.

How it works

Data / label type2 labelers3 labelers
Yes/no or categoriesCohen's kappa (S1)Fleiss' kappa (S3)
Ordered grades or rubricWeighted kappa, quadratic (S2)Krippendorff's alpha, ordinal (S4)
Numeric scoreICC, two-way absolute agreement (S5)
Image segmentationDice (+ IoU) per structure (S7, S8)Mean pairwise Dice
EEG/ECG/PPG eventsEvent-level F1 with a stated tolerance window (S11, adapted)Mean pairwise event F1
Sleep stagingCohen's kappa, epoch-level (S1, S12)Fleiss' kappa (S3)

Also report raw percent agreement and per-class agreement: kappa can look low when one class dominates (S6). Landis & Koch bands (S13) are commonly cited bands, not a pass/fail threshold; for ICC see Koo & Li (S5).

Frequently asked questions

How much of my data should be double-labeled?

There is no single published rule. Small or high-stakes sets are often fully double-labeled; large sets often double-label a sample big enough to estimate agreement reliably. This tool's percentages are editable starting assumptions; reference-standard sets for FDA submissions typically use multiple qualified readers per case.

Which agreement metric should I use?

It depends on the label: Cohen's kappa for two labelers on categories, Fleiss' kappa for three or more, weighted kappa for ordered grades, ICC for numeric scores, Dice for outlined regions, and event-level F1 for EEG or ECG events. Report raw agreement too, because kappa can look low when one class is rare.

Is the hours estimate a quote?

No. It's a rough range from editable assumptions about minutes per item and disagreement rates. Real throughput depends on your data and label spec and is measured in a pilot. For a scoped pilot, contact us for pricing.

Methods and sources
Assumptions you can edit
  • Double-label share: 100% up to 500 items, 25% for 501–5,000, 10% above 5,000, with a floor of 200 items (assumption, editable).
  • Complex tasks double the share, capped at 100% (assumption, editable).
  • Minutes per item by data type and complexity (assumption, editable).
  • Disagreement rate 15% (low) to 30% (high); adjudication minutes equal labeling minutes (assumption, editable).
  • Setup overhead 16 (low) to 40 (high) hours, ×1.5 for FDA mode (assumption, editable).

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